Dear Sebastian,
As of now, I do not really have an Auto EVB on-hand to connect a scope to it, and before starting building and running this test setup (involving other people as well), I'd like to first understand what new we are expecting to see during this test.
The major point here is that the Ethernet PHY used on it (see datasheet attached) requires the same clock/data timing (data sampled on clock's rising edge) as yours, right? - Since both of them are based on the same RMII specification.
I am not a SW person, but is it possible to run our Auto EVB code on your board, even though some part of the IOs will be configured inappropriately for your board? - At least the Ethernet section will be configured fully identically to how it is on the Auto EVB.
Sincerely, Naoum Gitnik.