Hi Dirk,
Glad to see that tweaking 6DOF_GY config macros helping you.
Regarding storing Gyro calibration offset to NVM: The offsets can be measured by first taking some readings while the unit is not moving, then you can save the measured offset values and apply when reading the gyro values in the future. The calibration offset measurement for 6DOF_GY should take no time.
Remember that the sensor calibration is unique to the sensor unit for which it is computed and the calibration values are stored in the MCU flash memory. If you move sensor unit from one MCU board to another you will need to erase previously stored calibrations in MCU flash. You can refer to "EraseGyroCalibrationFromNVM" function).
Regards,
Amit Purohit.