Hi, Vivek,
I suppose that you can output PWM signals, but you want to control to start/stop the PWM signals as you expected.
As you know that the PWM signals are designed to output continuous waveform, it is not flexible to start or stop the PWM signals.
Anyway, there are two methods to start/stop PWM waveform, one is to control the Timer Counter, you can enable it to count tick or stop counting tick. Another is to control PWM pins to change the pin logic, while the Timer Counter works normally and continue to count tick, the PWM signals work normally, but just CAN NOT output to PWM pads.
For the first method, you can write the PWM Timer Control Register to start/stop the Timer counter.

For the second method, you can clear the PWMENAx bits in PWM Control Registers, I suppose that the PWM pins will be in tri-state(high impedance), in the case, you can use external pull-up/down resistor to set the pin logic. Note I am not sure if the PWM pins are in high impedance state when you clear the PWMENAx bits in PWM Control Register, pls have a test. Or you can configure the PWM pins in GPIO mode to set/clear the pin logic as you expected. Pls refer to section 24.7.6 PWM Control Registers (PWM1PCR - 0xE001 804C).
Hope it can help you
BR
XiangJun rong