The short answer to your original question is "yes". I will preface what I'm saying by noting that I've only worked with the RT1052 and its eval board, not the RT1064; I am assuming that the RT1060 EVK also defaults to HyperFlash operation. The SDK examples for the RT1050 EVKB are all built to be loaded into and run out of HyperFlash. To boot and run from a QSPI flash, you just need to alter the flexspi_nor_config_t structure that appears in the boot header that's built into the image. (On the EVKB, you would also need to solder and de-solder a number of 0402 jumpers.) For what it's worth, I've attached the file I'm presently using with my custom RT1050 board which uses the same QSPI flash device that's present on the EVKB. In my preprocessor macros, I include these settings:
USE_QSPI
XIP_EXTERNAL_FLASH=1
XIP_BOOT_HEADER_ENABLE=1
XIP_BOOT_HEADER_DCD_ENABLE=1
SKIP_SYSCLK_INIT
The first macro is one that I created and inserted into my NOR config file to select between QSPI and HyperFlash. The next two you want to define if you're booting and running out of flash. The last two you want to define if you also want to include DCD data, for instance if you're initializing SDRAM and the necessary PLLs for that at boot time.
David R.