Hello,
Thank you for your support.
I have set the following:
IOMUXC_SW_PAD_CTL_PAD_GPIO05 = 0x1b0b0
IOMUXC_SW_MUX_CTL_PAD_GPIO05 = 0x3
CCM_CCOSR = 0x8e
The problem that the pin on the board I can put an oscilloscope on it and measure clock can only be one of the GPIOs pins available on a phyFlex module with imx6 processor. The hardware engineer told me he can export on the GPIO pins of the board only one of those GPIOs.
GPIO1_IO05 is not on that list. I programmed correctly the iomux for GPIO5, selected correctly the mux mode and configured CCM_CCOSR register correctly
in order for CLKO1 to be enabled and ckil_syn_clk_root clock to be used. The problem is that I told hardware engineer to export the GPIO1_IO05 on the board
and that pin is not available in the list of GPIO pins for user purposes that the imx6 module I have offers.
So the question would be how to connect GPIO1_IO05 to a GPIO that can be exported on a GPIO pin on my board so I can actually be able to measure and use the clock I configured.

Thank you,
Mihaita