Hi Michael,
To ensure you have open all the correct projects I recommend you close all projects in CW10.6.4, then drag-n-drop the "C:\Freescale\Freescale_MQX_4_2\demo\pe_demo\build\cw10gcc\pe_demo_frdmk64f\pe_demo_frdmk64f.wsd" file into the "CodeWarrior Projects" window. This will ensure only the projects you need are opened.
Then do a clean of all projects as Daniel mentions.
Then for the bsp_frdmk64f have your Processor Expert->Show Views opened so you can see the Components window.
In the components window, click the "Generate Processor Expert Code" icon to have PE generate the example code to the bsp.
Now compile the BSP, then the PSP, then the pe_demo_frdmk64f application.
I just tried these steps successfully.
Regards,
David