Hi, Yuri,
The D1 is a LED with 0805 package, you can use any LED, which only indicates that the LPC1113 works fine by toggling constantly. The Q2 is a 12MHz crystal with 4 pins, you can use any crystal with 12MHz.
Regarding the FIDUCIAL_0.6 , I do not know. I will ask the other engineers for help.
BR
Xiangjun Rong