Kevin
The traffic is coming from the USB host and not the device.
USB-CDC uses bulk mode and the USB host will be able to define almost the complete USB bandwith to the bulk IN polling (assuming not using a hub or a composite device), meaning that it is sending IN token, which your device wil be NAKing at the hardware level (the USB FS device does this when it has no data to return). Therefore it is polling as fast as it can.
USB cabes and screening are designed and specified so that this can usually be tolerated. If your EMV emission levels are too high check the quality of the USB cable used (cables with USB logo should be certfied for the operation but cheap black-market copies will possibly not). Also check the ends of the USB cable and the earthing to housing and the board. Usually earthing at only one end is recommended and the grounding at the board via ferrite elements can be useful. Also check the recommendation in the USB specification - EMC behavior is a part of its specification and so the specification gives a lot of practical details along with rules to be followed.
Regards
Mark
P.S: The traffic on the USB can only be redued by avoiding classes that using bulk IN endpoints and poll only using interrupt IN endpoints, where the speed of polling is then defined and fixed (eg. once every 32ms) but it is beter to solve the problem with a solid HW design since this is possible.
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