It is true that there are some differences between the spec documentation of the board and the flash chip that is on the board but regarding the user they are compatible. Therefore I advise you to edit your 8349ITX_rev1._FLASH.xml file from CW 8.8 installation folder\bin\Plugins\Support\Flash_Programmer\EPPC\83xx directory that is specifying the algorithm too as in the attached screenshot and I hope everything will be OK (see the attached 8349ITX_rev1_FLASH_xml.JPG):
<flashconfwindow>
<membaseaddr>0xFF000000</membaseaddr>
<device>AM29LV128ML</device>
<organization>8Mx16x1</organization>
<flashstart>0xFF000000</flashstart>
<flashend>0xFFFFFFFF</flashend>
If still not working, please log a service request here. Thank you.