Hi Nikesh,
Could you describe your issue more in the detail?
Do you use a project generated by the CodeWarrior Wizard? Have you customized the project settings?
Can you attach your internal_Flash .map + .mcp files?
Also some debugger screenshots that show the problem (e.g. the debugger after internal_flash elf is loaded, and when you run/stop execution which shows execution from ram) would help us to resolve this issue.
Thanks.
Stan