Hi:
The i.MX6 PCIe MSI had been verified by the following in the imx_3.0.35 4.0 and 4.1 releases.
* intel e1000e 1000M network cards.
* PCIe to USB3.0 card.
* intel iwl4965, 5100, 620, and 630 wifi cards.
BTW, what's kind of release used by customer? Did you ever tested customer's PCIe EP device on FSL's reference board?
Best Regard
Richard