Hello SV,
The latest manufacturing tool for the i.MX28 IMX_MFG_TOOL(REV 1.6.2.048) was tested in Windows 7 but not in Windows 10. However, have you tried running the Windows 10 compatibility tool on the manufacturing tool?
You may right click on the app's icon, select "Properties" and then click on the compatibility tab, and set the properties appropriately. Win 7 compatibility and "run as admin" might help.
I hope this helps!
Regards,