Ans 1: The total package failure rate is divided by total pins of the device to get the failure rate of a single pin. This failure rate is used to model dedicated Pins (such as supply pins) in the Power FMEDA. And we provide this failure rate as an example in Peripheral FMEDA to enable our customers perform the pin analysis based on their application and number of safety related pins.
Ans 2: The die failure rate through IEC 62380 is for permanent faults only. You are right that additional failure rate is due to soft-error and we indeed use JESD89 to calculate the transient failure rate. We have provided some information around it in the safety analysis reports (for s32K344 they are here: https://community.nxp.com/t5/SafeAssure-NDA-group/Safety-Analysis-Report-S32K144/ta-p/1107391)
I hope this helps.
Regards
-Aarul