Hi,
Your assumption is correct, the number is related to the wakeup input number.
As tolds in the Linux User Manual, you need to modify the device tree in the TF-A itself, then you need to rebuild the Linux image for it to have the change you are implementing.
As for what wire is available, looking into the breakout/connectors, there is no direct connection to a WKPU pin itself, meaning you might need to rework the board if you are planning on using a WKPU without the need of sending a specialized wakeup message through LIN/CAN interfaces.
At this point, we might recommend opening a ticket on NXP online services, for them to see if there is something available under this topic. As said in the Linux User Manual:
"In order to manually wake the platform up, one needs to apply 3V3 voltage to the configured GPIO pin. This specific process is outside the scope of this document."
Please, let us know.