Hi @jemish_1990
I hope you are doing well.
-> Have you followed the standard hardware design steps of pcie in your custom board?
-> Can you please check the below mentioned points into your custom board?
1. 3V3 voltage and clock signal
2. Resistance from the transmitter to the ac-coupling capacitor. Then, measure from the other side of the ac-coupling capacitor to the receiver.
3. power and ground on both sides of the link
4. check the voltage supplies at the transmitter with respect to ground. Then probe from the ground of the transmitter to the ground of the destination of the signal and see if there is any voltage difference.
Thanks & Regards.
Sanket Parekh