Hi
I had replied to your case 00616382 for this topic,please let me know if you still have any issue.
Here I tested the SBC in the LPOFF mode and stay last above 5s then wake up still no found the SPI_RE bit set as '1'.
1: You can check the SPI_RE bit value in normal mode without operate the INIT related registers any more:

2: set command to enter into LPOFF mode,then wake up,read SPI_RE bit again.
3: pay attention that during the INIT phase don't operation others registers except above picture showed five registers,otherwise SPI_RE will set as '1'.