Hello @V_Palacio,.
Hope you are doing well.
An SDK is bound to a certain firmware version. If FW version of PN7642 does not match the FW used by the SDK, some issues and unexpected behaviors can occur. Please make sure you are using the latest firmware version available; you can run the check_nxpfw_update demo from PN7642 SDK, and if PN7642 and SDK firmware versions do not match, this demo will help you updating the FW.
You can also try deleting the debug configuration (*.launch file that is generated for the debugging) and start the debugging session again. If possible, please do some tests using J-Link firmware for your debugger.
Still, the behavior you observe during debugging should be related to the OS, and as you pointed out, it would be expected after the Scheduler starts running. To debug, please consider setting a breakpoint, reach it, disable it, and run until the next one.
Regards,
Eduardo.