Hi, Matthias,
If you clear the PWMA_EN/PWMB_EN bits in PWMA_OUTEN register, the PWM output pins will be disabled, in the case, the PWM_A and PWM_B pins will be float(in high impedance), the external pull-up or pull-down resistor will determine the pins state.
Because I am taking vacation, I can not test it, pls test it yourself.
BR
XiangJun Rong