Hello
How are you trying to load/write data to flash?
Only way CodeWarrior allows you to write data to flash is trough the Tools -> Flash Programmer menu entry.
Tools -> Hardware diagnostic allows you to check connection issue and only allows to to write data into RAM.
You can only load a file (S record or elf) through the Flash Programmer window only.
Hitting debug button in the IDE will not program the flash.
Just wanted to make sure you are not going the wrong way around.
CrasyCat