Hello Dean Saridakis,
I assume that you use CodeWarrior for PA, you could lauch CCS located in C:\Freescale\CW_PA_v10.5.1\PA\ccs\bin\ccs.exe from Windows cmd shell. If you enter "log v", the detailed low level communication information between CodeWarrior and the target board will be displayed.
If I misunderstood your purpose, please kindly explain more.
Have a great day,
TIC
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