Flashing green light does indicate the fusion software is running on the board.
You are downloading directly from KDS? It's probably a problem with your OpenSDA installation (either board or PC).
If your K64F has MBED CMSIS-DAP installed, it should show up as "MBED" in Windows Explorer. You should see "mbed Serial Port" listed under Ports in the device manager.
If you are using a segger interface, there's no mass storage device view, and you shuold see JLink CDC UART Port under Ports in the device manager.
If you don't see these in the device manager, then you need to download drivers for your version of OpenSDA. Go to freescale.com/opensda and select K64F from the pull down menu to see your options.