Hi Basil,
just idea: The S12ZVML MINIBRD board is hardware design without an external crystal. However, the AN5327 single shunt sensorless software expects external crystal as the clock source. You need to change clock settings from PEE mode to PEI mode when you use AN5327 software.
I hope it helps you
Have a great day,
Radek
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Hi Basil,
Based on what is see in the screenshot, it appears you do not have a valid connection with the board.
Please try to toggle the "Stop" button to disconnect and connect back to the target.
Also, the UART baud rate, in the Freemaster settings should be the same as the one set in the Freemaster panel in Simulink.
Hope this helps!
Daniel