I have just completed a project using a S08SH. It uses FC1 with device TPM10 to generate an interrupt every 2mS.
I am now using a S08QE and I also need an interrupt every 2mS. I added component FC1 and copied the settings EXACTLY as before. Now I get an interrupt every 100mS - no matter what value I set for the Period/Offset. I also checked the Cpu settings against the S08SH project.