Hello Hu Bin,
As shown in the below figure, the FlexSPI pins PAD corresponds to GPIO_SD_B0 and GPIO_SD_B1.

On the datasheet, you can see that for NVCC_SD1 and NVCC_SD2 (which supplies GPIO_SD_B0 and GPIO_SD_B1 pins respectively), you have two operating modes: 3.3V and 1.8V.

So, the voltage level of the FlexSPI will depend on the mode that you select for NVCC_SD1 and NVCC_SD2, it can be 1.8V (as the evaluation board) or 3.3V.
Have a great day,
Victor
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