Hi @Lukaz
We need to make sure that your design complies with the power-up , and power down sequence.

For example , here is an snapshot that I took the other day, from our RT1060 EVK. The first three signals from the above diagram are captured.

Do you have capture of the supply rail that rises sharply sometimes, against others?
Do you implement an external reset monitoring circuit?
Many thanks for your patience,
Diego