Hi @strnadel ,
About the GPT2_COMPAREx pins can be found as follows:

In the MIMXRT1050-EVKB rev A1, the related point is:

You can find, it is the JTAG/SWD related pins.
You can use GPT2_COMPARE3 (GPIO_AD_B0_08), it is TP11, but please note, when do the testing, make sure, when enter the debug mode, it is pull down, otherwise, the debug will be influenced.
Wish it helps you!
BTW, as this case is a little old, if you have any new updated information, it's better to create the new question post and let me know. To one case, it can't open too long time, thanks a lot for your understanding.
Best Regards,
kerry