Hi Igor,
i think we talk from different things.
We set the brownout to 2.4V, in normal usecase there's a 4V LDO which is charging an electrolyt capacitor on VBATT. In an Powerloss event, the electrolyt capacitor can supply the imx28 for about 50ms, to save our data.
So the brownout is ok in this case, it's a result of the discharging capacitor.
In brownout condition VDDIO, (3.25V in our case) begins to decrease slowly, in the same moment, there's a current of about 10µA (Sorry, i had a false voltage value yesterday) flowing into the input pin.

Green: VDDIO
Blue: LCD_D02/ETM_DA2/GPIO1_2
As you can see, there's an instant drop of 0,5V, so there's a current of 10µA.
The blue signal is directly pulled directly to VDDIO, no other connections on my application.
Is it possible, that the gate keepers draw the current at first moment after reset?