Hi,
This sentence means NVCC_LVDS2P5 must be supplied during DSM mode, but for LVDS, it does NOT matter whether you connect the screen or not, just make sure that there is 2.5V supplied to NVCC_LVDS2P5.
For the measurement of VDDARM_CAP, I think you can measure the CAPs on this power rail, there should be many CAPs connected in this rail. It is right in the back side of the i.MX6Q chip, you need to find the right CAP, or you can just measure the pin4 of PMIC, it is PMIC_VSTBY_REQ pin, it should be high when CCM is in STOP mode.
On SDP board, I think you can just measure the voltage drop of R21(VDDSOC_IN) or R27(VDDARM_IN), it is a 0.02 Ohm resistor, then we can get the power consumption of VDDARM and VDDSOC. For example, if the voltage between two sides of R21 is 0.6 Volt, then the power consumed by VDDSOC_IN is 0.12 / 0.02 = 6mA. Please measure these power consumption first, I guess the reason why your board still consume many power in DSM mode should be the peripheral device still consuming power, otherwise, CCM should be not in STOP mode.