Bharathi,
PCI Express SGDMA is ~200 MBytes/second with smallest payload, per lane. On small embedded SoCs, depending on the SoC we have measured 170 MBytes/second to 210 MBytes/second. Only few SoCs come with multiple lanes, such as the Freescale PowerPC P2022, which is a 4 lane SoC.
For i.MX5, if you need that kind of bandwidths to/from the FPGA, indeed you would have to (ab)use SATA or another high speed interface. i.MX6 brings PCIe connectivity.
If you need more info on Lancero specifically, contact me directly, I think this is off-topic here.
Regards,
Leon.