Yes, changing DLYDIV_SEL will reconfigure the PLL1, and thus the PLL Reset and Reconfiguration process defined in section 19.6.4.3 of the Reference Manual must be followed. This process ensures that the PLL1 is properly reset and reconfigured with the new settings.
It is recommended to disable all PCIe controllers attached to PLL1 before changing DLYDIV_SEL for PLL1. This is to prevent any data loss or corruption during the reconfiguration process. It is also important to ensure that the SerDes protocol F236 is properly configured to use SG2 as 1000BaseKX, as any misconfiguration can lead to operational issues.
Changing DLYDIV_SEL for PLL1 should not impact the operation of the PCIe interfaces on that PLL1 after the process is followed. However, it is recommended to perform thorough testing and validation of the system after any changes are made to ensure that there are no unexpected issues.
Regards,
Rachel Gomez