No. They are the same.
I don't think it is an issue with communicating with the board, unless you are saying that CW is showing some thing other that what you wrote to the port.
I/O ports can be moved - this is rarely done, but you could check that. There is a register you write to to change that base address of the ports. I have not ever done this, but it is possible.
The only other thing I can think of is a pull up. The chip has active pull ups, so you should see a signal.
What is this pin driving?