Hi Barber,
Are you using CW10.x?
If yes, open it, select the Help-->Welcome to get the welcome screen when a new workspace is opened.
Towards the bottom of the page (its a long page too) select/click "Using the Flash Programmer".
Then look at the "Create a Flash Programmer Target Task" and the sub headings.
The Target Task will let you select what flash sectors you want to erase and/or not to erase.
Hope this helps.
Regards,
David