Hi,
MIMXRT1064 default has on board CMSIS-DAP debug. MCUXpresso can recognize it directly. Do you mean your MCUXpresso can't recognize on board debug?
1. I think first you can check J47,J48,J49,J50. Since you have test by I-jet, these jumper must be disconnected.
2. When connect MIMXRT1064 USB debug port, the computer shows a RT1064-EVK disk has been found. Can you see it? If not, please see this page OpenSDA Serial and Debug Adapter | NXP
3. CMSIS-DAP also need driver. You can download this driver from above link.
If you don't want to use on board openSDA, you can use Multilink or Jlink or ulink. MCUXpresso can support them.
Regards,
Jing