Hi Neil Porven,
Sorry for my mistake, the picture I post is from the older datasheet.
Now the new datasheet can be downloaded from this link:
http://www.nxp.com/assets/documents/data/en/data-sheets/MKE02P64M40SF0.pdf
Page 22

Now, there has two points you need to take care:
1. Trim configuration
I don't know which code you are using? And how you get the trim data.
Normally, we use the Codewarrior or the KDS PE code, like this:

Then use the PE debugger to trim it, it will save the trim data in address 0x3ff, and 0x3fe.

I also attached my test project for your reference.
You can trim the 31.25Khz which is the default trim data, please also take care, the trim temperature should in 25C, VDD=5V.
2. Make sure your FLL out (DCO) is in the range of 32Mhz to 40Mhz.

Please trim it in temperature 25C, 5V VDD at first, then add the temperature to 80C, check whether it still have this problem.
Wish it helps you!
Have a great day,
Kerry
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