All the three debug connections in KDS (Segger, P&E and OpenOCD) come with standalone command line gdb servers and tools, so you could use those?
That way you can use it outside of the IDE.
P&E command line tool is located in (for Windows):
C:\Freescale\KDS_1.1.1\eclipse\plugins\com.pemicro.debug.gdbjtag.pne_1.1.4.201409071615\win32
Segger tools are located in:
C:\Freescale\KDS_1.1.1\segger
OpenOCD tools are located in:
C:\Freescale\KDS_1.1.1\openocd
Basically they support the gdb commands, consult the documentation of each vendor/supplier.
I hope this helps,
Erich